CDS

Accession Number TCMCG047C16472
gbkey CDS
Protein Id GFP95037.1
Location complement(join(59092..59302,60250..60540,61269..62085,63042..64998))
Organism Phtheirospermum japonicum
locus_tag PHJA_001648100

Protein

Length 1091aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJDB3858 BioSample:SAMD00029051
db_source BMAC01000374.1
Definition phytochrome a1 [Phtheirospermum japonicum]
Locus_tag PHJA_001648100

EGGNOG-MAPPER Annotation

COG_category K
Description Regulatory photoreceptor which exists in two forms that are reversibly interconvertible by light the Pr form that absorbs maximally in the red region of the spectrum and the Pfr form that absorbs maximally in the far-red region
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
KEGG_ko ko:K12120        [VIEW IN KEGG]
EC -
KEGG_Pathway ko04712        [VIEW IN KEGG]
map04712        [VIEW IN KEGG]
GOs GO:0003674        [VIEW IN EMBL-EBI]
GO:0003676        [VIEW IN EMBL-EBI]
GO:0003723        [VIEW IN EMBL-EBI]
GO:0003729        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0004672        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005515        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005654        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0006417        [VIEW IN EMBL-EBI]
GO:0006464        [VIEW IN EMBL-EBI]
GO:0006468        [VIEW IN EMBL-EBI]
GO:0006793        [VIEW IN EMBL-EBI]
GO:0006796        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0007154        [VIEW IN EMBL-EBI]
GO:0007165        [VIEW IN EMBL-EBI]
GO:0007275        [VIEW IN EMBL-EBI]
GO:0007602        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009314        [VIEW IN EMBL-EBI]
GO:0009416        [VIEW IN EMBL-EBI]
GO:0009581        [VIEW IN EMBL-EBI]
GO:0009582        [VIEW IN EMBL-EBI]
GO:0009583        [VIEW IN EMBL-EBI]
GO:0009585        [VIEW IN EMBL-EBI]
GO:0009605        [VIEW IN EMBL-EBI]
GO:0009606        [VIEW IN EMBL-EBI]
GO:0009628        [VIEW IN EMBL-EBI]
GO:0009629        [VIEW IN EMBL-EBI]
GO:0009630        [VIEW IN EMBL-EBI]
GO:0009637        [VIEW IN EMBL-EBI]
GO:0009638        [VIEW IN EMBL-EBI]
GO:0009639        [VIEW IN EMBL-EBI]
GO:0009640        [VIEW IN EMBL-EBI]
GO:0009642        [VIEW IN EMBL-EBI]
GO:0009791        [VIEW IN EMBL-EBI]
GO:0009881        [VIEW IN EMBL-EBI]
GO:0009883        [VIEW IN EMBL-EBI]
GO:0009889        [VIEW IN EMBL-EBI]
GO:0009890        [VIEW IN EMBL-EBI]
GO:0009892        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010017        [VIEW IN EMBL-EBI]
GO:0010018        [VIEW IN EMBL-EBI]
GO:0010114        [VIEW IN EMBL-EBI]
GO:0010161        [VIEW IN EMBL-EBI]
GO:0010201        [VIEW IN EMBL-EBI]
GO:0010203        [VIEW IN EMBL-EBI]
GO:0010218        [VIEW IN EMBL-EBI]
GO:0010468        [VIEW IN EMBL-EBI]
GO:0010556        [VIEW IN EMBL-EBI]
GO:0010558        [VIEW IN EMBL-EBI]
GO:0010605        [VIEW IN EMBL-EBI]
GO:0010608        [VIEW IN EMBL-EBI]
GO:0010629        [VIEW IN EMBL-EBI]
GO:0016301        [VIEW IN EMBL-EBI]
GO:0016310        [VIEW IN EMBL-EBI]
GO:0016604        [VIEW IN EMBL-EBI]
GO:0016740        [VIEW IN EMBL-EBI]
GO:0016772        [VIEW IN EMBL-EBI]
GO:0016773        [VIEW IN EMBL-EBI]
GO:0017148        [VIEW IN EMBL-EBI]
GO:0019222        [VIEW IN EMBL-EBI]
GO:0019538        [VIEW IN EMBL-EBI]
GO:0023052        [VIEW IN EMBL-EBI]
GO:0031323        [VIEW IN EMBL-EBI]
GO:0031324        [VIEW IN EMBL-EBI]
GO:0031326        [VIEW IN EMBL-EBI]
GO:0031327        [VIEW IN EMBL-EBI]
GO:0031516        [VIEW IN EMBL-EBI]
GO:0031974        [VIEW IN EMBL-EBI]
GO:0031981        [VIEW IN EMBL-EBI]
GO:0032268        [VIEW IN EMBL-EBI]
GO:0032269        [VIEW IN EMBL-EBI]
GO:0032501        [VIEW IN EMBL-EBI]
GO:0032502        [VIEW IN EMBL-EBI]
GO:0034248        [VIEW IN EMBL-EBI]
GO:0034249        [VIEW IN EMBL-EBI]
GO:0036211        [VIEW IN EMBL-EBI]
GO:0038023        [VIEW IN EMBL-EBI]
GO:0042221        [VIEW IN EMBL-EBI]
GO:0042802        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043233        [VIEW IN EMBL-EBI]
GO:0043412        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044267        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044451        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0046685        [VIEW IN EMBL-EBI]
GO:0048519        [VIEW IN EMBL-EBI]
GO:0048523        [VIEW IN EMBL-EBI]
GO:0048856        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050794        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0051171        [VIEW IN EMBL-EBI]
GO:0051172        [VIEW IN EMBL-EBI]
GO:0051246        [VIEW IN EMBL-EBI]
GO:0051248        [VIEW IN EMBL-EBI]
GO:0051606        [VIEW IN EMBL-EBI]
GO:0051716        [VIEW IN EMBL-EBI]
GO:0055122        [VIEW IN EMBL-EBI]
GO:0060089        [VIEW IN EMBL-EBI]
GO:0060255        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0070013        [VIEW IN EMBL-EBI]
GO:0071214        [VIEW IN EMBL-EBI]
GO:0071478        [VIEW IN EMBL-EBI]
GO:0071482        [VIEW IN EMBL-EBI]
GO:0071489        [VIEW IN EMBL-EBI]
GO:0071490        [VIEW IN EMBL-EBI]
GO:0071491        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0080090        [VIEW IN EMBL-EBI]
GO:0097159        [VIEW IN EMBL-EBI]
GO:0104004        [VIEW IN EMBL-EBI]
GO:0140096        [VIEW IN EMBL-EBI]
GO:1901363        [VIEW IN EMBL-EBI]
GO:1901564        [VIEW IN EMBL-EBI]
GO:2000112        [VIEW IN EMBL-EBI]
GO:2000113        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGTCGCAGCCCGTTCAGTCCTCCACAAACTCGGCCCGATCAAGGCACAGCGCAAGGATAATCGCCCAAACATCCATAGACGCGAAGCTCCACGCCGATTTCGAAGAATCGGGCAGCTCGTTCGACTACTCCAGCTCTGTCCGCGTCTCAAACGCCCCCACCGGCGAGTCCAGGCCTGGAGGGTCCCACAAGGTCACCACTGCCTACCTCCACCAAATCCAGAAAGGCAAACTGATACAGCCCTTCGGCTGTCTCTTAGCCCTCGACGAGAAAACGTTCCAAGTCATTGCCTACAGCGAGAACGCGCCCGAGATGCTCACGATGGTCAGCCACGCCGTCCCGAGCGTCGGGGACCACCCGGTCCTCGGCATCGGATCCGATATCCGAACCATTTTCACCACTCCGAGTGCCGCAGCTTTACAAAAGGCTCTAGGGTTCGGCGAGGTTTCGCTTCTGAACCCGATCTTAGTTCACTGCAAAACCTCCGGGAAGCCGTTCTACGCTATAATCCACCGTGTCACGGGTAGTTTGATAATTGACTTCGAGCCCGTTAAGCCTCACGAGGTCCCAATGACCGCTGCGGGTGCTTTACAGTCATATAAGCTCGCGGCCAAAGCGATTACCCGTCTGCAAGCTTTGCCCAGTGGTAGCATGGAGCGTCTCTGCGATACGATGGTCCAAGAAGTGTTCGAACTCACGAGCTATGACAGGGTGATGATTTATAAATTCCACGACGACGATCACGGCGAGGTTTTATCCGAGATCACAAAACCGGGCCTCGACCCGTACGTTGGCTTGCACTATCCGGCGACCGATATCCCTCAGGCAGCCCGGTTTTTGTTCATGAAGAACAAGGTCAGGATGATATGCGATTGCCGGGCGAATCATGTCAAAGTAATCCAGGATGATAATCTTCCGTTCGACCTCACGTTGTGCGGGTCGACTCTCCGGGCCCCGCATAGCTGCCACTTGCAGTACATGGAGAACATGAACTCGATCGCGTCTCTAGTGATGTCGGTCGTGGTCAACGAGGGGAACGAGGACGGGCCCGATTCTTCTTCTTCCCACCCCGATAAGAAGAAACGGCTCTGGGGTTTAGTCGTTTGCCACAACACGAGCCCGAGGTTCGTCCCATTCCCTTTACGATACGCGTGCGAGTTTCTAGCCCAAGTTTTCGCTATCCACGTGAACAAGGAGATCGAATTGGAGAATCAAATGCTTGAGAAGAATATTCTCCGGACCCAGACGCTGCTGTGCGATATGCTGCTGCGGGATGCTCCGTTAGGTATCGTGTCCCAAAGCCCGAACGTGATGGACCTCGTGAAGTGCGACGGGGCCGTTTTAATATACAAGACTAAAAAATATCGGCTCGGGATGACCCCGAGTGATTTTCAGATCCGGGACATAGTTTCTTGGCTCGACGAGTACCACCGTGACTCGACGGGCCTGAGCACGGACAGTCTGTACGACGCGGGTTTTCCGGGAGCTTTAGCACTCGGCGATGCTGTCTGTGGGATGGCAGCGGTGAGGATAACCGACAAGGATTGGCTGTTCTGGTTCCGATCCCACACGGCGGCTGAGATTCGTTGGGGAGGTGCGAAACACGAGCCGGGTGAGAAGGACGATGGGCGAAAAATGCACCCAAGGTCGTCTTTTAAGGCGTTCTTGGAGGTTGTGAAGACGAGGAGTTTGCCTTGGAAGGATTTCGAGATGGACGCGATCCACTCGCTGCAGCTTATTCTGAGGAACGCGTCGAATAAGGAGGCGGAGGAGAGGGATATGGATGGGAAGGAAATTCATGCAAGGCTTAATGATCTGCAGCTGGATGGTATGCAGGAGCTGGAGGCGGTGACGTCGGAGATGGTGCGTCTGATCGAGACGGCGTCGGTGCCGATCTTTGCGGTCGATGTGGATGGGCTTGTGAACGGGTGGAACACGAAGATTGCGGATTTGACGGGGAATGAAGAGAGAAACGTACAATTTGAGATAAAAACCCACGGCCCGAGGAGCGAGTCCGGCCCGATCAGCCTAATTGTGAATGCCTGCGCGAGCCGGGACGTCAAGGAGAACGTCGTCGGCGTATGTTTCATTGCACAGGACATAACGACCCAGAAGAGTATGATGGACAAGTTCACCCGAATCGAAGGCGACTACAGAGCCATCGTCCAGAACCCGAACCAACTCATCCCTCCCATCTTCGGCTCCGACGAGTTCGGATGGTGCTCCGAGTGGAATGCGGCCATGACCAAAATATCCGGCTGGCGCCGGGACGACGTGATCGACAAGATGCTACTCGGCGAGGTGTTCGGGACTAGCAAAGCCTGTTGCCGCCTCAAGAATCAAGAATCGTACGTCAACCTCGGCGTCGTGCTAAACAATACGGTGACGGGCCAAGAACCGGGAAAAATACCGTTCGGGTTTTTCTCGAGGAGCGGAAAATACGTGGACTGCTTGCTCTGCGTGAGCAAGAAAGTGGACGGAGATGGGGCCGTGACGGGCCTTTTTTGCTTTCTGCAGCTGGCGAGCCCGGAGCTGCAGCAGGCGCTGCACGTGCAGAGGATATCGGAGCAGACGGCGACGAAGAGGTTGAGGGTGTTGGCTTATATTAGGAGGGAGATTAGGAATCCGCTTTCTGGGATTATATTTTCTAGGAAGATGATGGAAGGGACTGAGTTAGACGACGAGCAGACAAACCTTATGAAGACTAGTTTACACTGTCAACGTCAGCTGAATAAGATTTTGGATGATACAGATCTTGATTATATAATCGAAGGGTATTTGGACCTGGAGATGGTGGAGTTTAAGCTGCATGAAGTGTTGATTGCTTCCATTAGTCAAGTCATGATGAAGAGCAACGGAAAGGGTATTATGATAGTCGATAATTTGGCTCCAAATCTCTCTAACGAGACCCTGTACGGAGACAGCTTGAGGCTTCAGCAAGTCCTCGCTGCTTTCTTGCTGATATCGGTCAACTCCACACCGACTGGTGGTCAACTTGGTGTTGCAGCCACGTTGGCTAAAGATGCTATTGGGGAATCGGTTCAGCTTGGACATTTGGAATTCAGGATAACACATAGTGGAGGTGGAGTACCACAAGCATTGCTGAATGAGATGTTTGGCGACGAGGTGGATGCGTCTGAGGATGGGATCAGCCTTTTCATAAGTCGGAAATTGGTGAAGCTTATGAACGGAGACGTTCAGTATCTGAGGGAGGCGGGCCGATCCACTTTCATCATCTCCGTCGAACTAGCAATCTCTAATAAGTCCGAAGCGTGA
Protein:  
MSQPVQSSTNSARSRHSARIIAQTSIDAKLHADFEESGSSFDYSSSVRVSNAPTGESRPGGSHKVTTAYLHQIQKGKLIQPFGCLLALDEKTFQVIAYSENAPEMLTMVSHAVPSVGDHPVLGIGSDIRTIFTTPSAAALQKALGFGEVSLLNPILVHCKTSGKPFYAIIHRVTGSLIIDFEPVKPHEVPMTAAGALQSYKLAAKAITRLQALPSGSMERLCDTMVQEVFELTSYDRVMIYKFHDDDHGEVLSEITKPGLDPYVGLHYPATDIPQAARFLFMKNKVRMICDCRANHVKVIQDDNLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMSVVVNEGNEDGPDSSSSHPDKKKRLWGLVVCHNTSPRFVPFPLRYACEFLAQVFAIHVNKEIELENQMLEKNILRTQTLLCDMLLRDAPLGIVSQSPNVMDLVKCDGAVLIYKTKKYRLGMTPSDFQIRDIVSWLDEYHRDSTGLSTDSLYDAGFPGALALGDAVCGMAAVRITDKDWLFWFRSHTAAEIRWGGAKHEPGEKDDGRKMHPRSSFKAFLEVVKTRSLPWKDFEMDAIHSLQLILRNASNKEAEERDMDGKEIHARLNDLQLDGMQELEAVTSEMVRLIETASVPIFAVDVDGLVNGWNTKIADLTGNEERNVQFEIKTHGPRSESGPISLIVNACASRDVKENVVGVCFIAQDITTQKSMMDKFTRIEGDYRAIVQNPNQLIPPIFGSDEFGWCSEWNAAMTKISGWRRDDVIDKMLLGEVFGTSKACCRLKNQESYVNLGVVLNNTVTGQEPGKIPFGFFSRSGKYVDCLLCVSKKVDGDGAVTGLFCFLQLASPELQQALHVQRISEQTATKRLRVLAYIRREIRNPLSGIIFSRKMMEGTELDDEQTNLMKTSLHCQRQLNKILDDTDLDYIIEGYLDLEMVEFKLHEVLIASISQVMMKSNGKGIMIVDNLAPNLSNETLYGDSLRLQQVLAAFLLISVNSTPTGGQLGVAATLAKDAIGESVQLGHLEFRITHSGGGVPQALLNEMFGDEVDASEDGISLFISRKLVKLMNGDVQYLREAGRSTFIISVELAISNKSEA